High grade squamous intraepithelial lesion (HSIL) of the anus and anal canal

by Catherine Forse MD FRCPC
September 28, 2023


What is a high grade squamous intraepithelial lesion of the anus and anal canal? 

High grade squamous intraepithelial lesion (HSIL) is a pre-cancerous disease that starts from specialized squamous cells that cover the anus and inside of the anal canal. HSIL is called a pre-cancerous disease because over time it can turn into a type of anal cancer called squamous cell carcinoma. Another name for HSIL of the anal canal is anal intraepithelial neoplasia (AIN).

What causes a high grade squamous intraepithelial lesion of the anus and anal canal? 

Almost all cases of HSIL and squamous cell carcinoma involving the anus and the anal canal arise after the normal squamous cells become infected by a virus called human papillomavirus (HPV). There are many different types of HPV and each type is given a number. HSIL of the anal canal is most likely to be caused by HPV types 6, 11, 16,18, and 51. These types are called ‘high risk’ because of their association with both HSIL and cancer of the anal canal.

Can the cells in high grade squamous spread to other parts of the body?

No. Because HSIL is a non-invasive condition, the abnormal cells are unable to spread to tissues outside of the anal canal or to other parts of the body such as lymph nodes.

How is the diagnosis of high grade squamous intraepithelial lesion of the anus and anal canal made? 

If your doctor is concerned that you may have an abnormality of your anal canal, they will perform a procedure called anoscopy. During anoscopy, your doctor will insert an instrument called an anoscope into your anal canal. An anoscope has a light source that allows your doctor to see the entire inner surface of the anal canal. If there is an area of abnormal tissue, your doctor may take a small sample of tissue called a biopsy. In some hospitals, doctors may insert a special swab into the anal canal instead of performing a biopsy. The swab collects tissue cells from the surface of the anal canal. The specimen that is collected is called a cytology specimen. After tissue samples from the anal canal have been collected, they are examined under a microscope by a pathologist.

What does high grade squamous intraepithelial lesion look like under the microscope?

Unlike normal, healthy squamous cells, the nuclei of HSIL do not become smaller and flatter as they move from the bottom of the epithelium to the surface. Instead, the nuclei of HSIL are larger and darker and are found equally in all of the epithelial layers. The chromatin (genetic material) which is found inside the nuclei of the HSIL cells may be described as “coarse” or “vesicular”. Many dividing cells called mitotic figures may also be seen.  This indicates that the tissue is growing rapidly.

HSIL of the anal canal
This picture shows an example of HSIL involving the anal canal.

What is p16 and why is it important?

Cells infected with high-risk types of human papillomavirus (HPV) produce large amounts of a protein called p16. Your pathologist may perform a test called immunohistochemistry to look for p16 inside the abnormal cells. This will confirm the diagnosis of HSIL and rule out other conditions that can look like HSIL under the microscope. Almost all cases of HSIL are positive or reactive for p16 which means that your pathologist saw the p16 protein in the abnormal cells.

What happens after high grade squamous intraepithelial lesion is diagnosed?

All patients with HSIL should be followed closely or offered treatment to remove the disease.

There are several treatment options available for HSIL:

  • Local ablative therapy – Radiofrequency ablation or electrocautery can be used to remove the atypical tissue from the anal canal.
  • Topical therapy – A medication (e.g. trichloroacetic acid, imiquimod, 5-fluorouracil) can be applied to specific lesions or to the entire anal canal.
  • Surgery – Removal of the abnormal tissue through surgery may be recommended by your doctor if there is concern that there may also be squamous cell carcinoma. 

Please talk to your doctor about which of the options is best suited to you.

Other helpful resources

Canadian Cancer Society

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