Colorectal cancer is a cancer that starts in the lining of the large intestine, which includes the colon and the rectum. Almost all of these cancers begin in the gland-forming cells that line the inside of the bowel and grow outward into the wall. Pathologists call growth beyond the lining invasion. Once it happens, the cancer can reach nearby lymph nodes and, less often, spread to other parts of the body, which is called metastasis.
This article explains the pathology report created after surgery to remove a colorectal cancer, an operation that may be called a colectomy, a low anterior resection, or an abdominoperineal resection. It covers every item your pathologist is required to report, in the order you will find them, and it applies to all types of colon and rectal cancer. Reading it will help you understand what each term means and why it matters for your care.
Most colorectal cancer pathology reports include a section that looks like a list of headings, each followed by a short answer. This is called a synoptic report, and it follows a standard checklist published by the College of American Pathologists (CAP) and used by laboratories across North America, Europe, and much of the world. The checklist makes sure that every feature known to affect treatment decisions is reported for every patient, in the same words, no matter which laboratory examined the tissue.
One checklist covers colon and rectal cancers together, so your report may list items that do not apply to your situation. Several items apply only to rectal cancers, and a report on colon cancer will mark them “not applicable.” When any item does not apply, the report will say something like “not identified,” “not applicable,” or “cannot be determined.” Seeing those phrases does not mean something was missed. It usually means the feature was looked for and wasn’t there, or that the removed tissue didn’t include the structure being asked about.
This particular checklist is used for cancer removed by an operation. A polyp removed during a colonoscopy is reported using a different checklist, and so are slow-growing neuroendocrine tumors (carcinoid tumors), lymphoma, and sarcoma. If your report does not match the items described here, it may have been written from one of those other checklists. Our guide to the colonoscopy biopsy report covers samples taken during a colonoscopy.
A pathologist diagnoses colorectal cancer by examining a tissue sample under a microscope. In almost all cases, the first sample is a biopsy or a polyp removed during a colonoscopy, a procedure in which a flexible camera is passed through the bowel and tissue is taken from any abnormal area. Surgery follows, and the report described in this article comes from that surgical specimen.
The wall of the colon and rectum is built in layers. The innermost layer, the mucosa, contains the glands that line the bowel and sits on a thin sheet of muscle called the muscularis mucosae. Below that is the submucosa, then a thick muscle layer called the muscularis propria, then fat, and in some parts of the bowel an outer surface called the serosa. Under the microscope, the pathologist looks for tumor cells that have broken through the muscularis mucosae into the submucosa. That is the point at which a colorectal tumor is called invasive, because the submucosa is the first layer containing blood vessels and lymphatic channels large enough for cancer cells to travel through. Tumor cells confined to the mucosa are called intramucosal carcinoma or high-grade dysplasia and are not expected to spread.
Most colorectal cancers can be diagnosed based on tissue appearance alone. When the tumor is difficult to classify, the pathologist may perform immunohistochemistry, a test that uses colored stains to show specific proteins in tissue. Stains for CDX2 and CK20 help confirm that a tumor started in the colon or rectum rather than spreading there from somewhere else, and stains for synaptophysin, chromogranin, and INSM1 are used when a neuroendocrine carcinoma is suspected. After colorectal cancer is confirmed, imaging is performed to assess how far the disease has spread. This usually includes a CT scan of the chest, abdomen, and pelvis, and for rectal cancer, an MRI of the pelvis. A blood test for carcinoembryonic antigen (CEA) is often measured before surgery. The pathology report describes what was found in the removed tissue; imaging describes the rest of the body.
The first item on a colorectal cancer pathology report names the operation, which tells you which part of the large intestine was removed and sent to the laboratory as the specimen. Surgeons remove a length of bowel rather than just the tumor, because the blood vessels that supply that segment carry the lymph nodes that must be examined.
The report may also note that additional organs or tissue were removed with the bowel, or that lymph nodes were submitted as a separate specimen.
Tumor site names the part of the colon or rectum the colorectal cancer arose in. The pathologist selects every subsite the tumor involves so that a large cancer may have more than one name.
Cancers of the rectum are managed differently from cancers of the colon, and several items on this checklist are completed only for them. Which side of the bowel a cancer started on also carries real information. Cancers on the right side more often have a faulty DNA repair system, more often produce mucus, and respond differently to some drugs, while cancers on the left side more often respond to a class of treatments called anti-EGFR therapy. Your oncologist uses the site alongside the molecular results described later in this article.
For rectal cancers only, the report also states where the tumor sits relative to a fold of tissue called the anterior peritoneal reflection: entirely above it, entirely below it, straddling it, or not specified. This matters because the rectum is only partly covered by the smooth membrane that lines the abdomen. A tumor below the reflection is surrounded by fat rather than that membrane, which changes how surgeons assess margins and which treatments they consider before surgery.
The rectum sits inside an envelope of fat called the mesorectum, which contains the lymph nodes that drain it. In modern rectal cancer surgery, the surgeon removes that envelope intact, an operation called total mesorectal excision. After removing the rectal cancer, the pathologist examines the outer surface of the specimen before cutting into it and grades how completely the envelope was removed. Reports on colon cancers mark this item “not applicable.”
The whole specimen is graded by its worst area. A complete mesorectum is associated with a lower chance of the cancer returning in the pelvis, and this item is one of the few places in pathology where the report describes the operation itself rather than the disease. A near-complete or incomplete result may be considered when radiation and follow-up are discussed.
Histologic type describes what the colorectal cancer looks like under the microscope. Pathologists assign the type using the World Health Organization (WHO) classification of digestive system tumors. For most patients, the type is conventional adenocarcinoma, and the stage, the grade, and the molecular results carry more weight in treatment decisions than the type alone. A few of the types below behave differently enough that naming them changes how we understand the cancer.
Adenocarcinoma is by far the most common type of colorectal cancer, accounting for roughly 85 to 90 out of every 100 cases. It develops from the gland-forming cells that line the inside of the bowel. Under the microscope, the tumor cells form irregular glands and tubes that push through the wall, and the surrounding tissue often reacts by becoming dense and scar-like, a change called desmoplasia. Most of these cancers grow out of a precancerous polyp over a period of years, which is the reason colonoscopy screening prevents cancer rather than only detecting it.
When your report says adenocarcinoma with no further qualifier, it means the tumor shows the usual pattern and does not meet the criteria for one of the named types below. This is the expected result and not a sign that the tumor was hard to classify.
Mucinous adenocarcinoma is the second most common type, making up roughly 5 to 15 out of every 100 colorectal cancers. It is diagnosed when more than half of the tumor is made up of pools of mucin, the slippery substance normally produced by the lining of the bowel, with tumor cells floating in it. Mucinous cancers are more common on the right side of the colon and more often have a faulty DNA repair system, which is why the mismatch repair testing described later in this article matters particularly here. When a tumor contains mucin but less than half of it is mucinous, the report usually describes it as an adenocarcinoma with mucinous features rather than assigning the mucinous type.
Each of the following accounts for a small share of colorectal cancers, usually fewer than 5 out of every 100. Every one of them appears on the checklist, so your report may name a type you have never heard of.
If your tumor does not fit any listed category, the report will say “other histologic type” and describe what was seen. If the tissue was too damaged or too poorly preserved to classify, it will say “carcinoma, type cannot be determined.” Some reports add a histologic type comment, which is free text the pathologist uses to explain an unusual feature or a mixture of patterns.
Slow-growing, well-differentiated neuroendocrine tumors, sometimes called carcinoid tumors, are reported on a separate checklist and are not covered by the items in this article.
Histologic grade describes how closely the colorectal cancer cells resemble the normal glands of the bowel. It is based on how much of the tumor forms recognizable glands, and it is reported on a four-tier scale.
Many oncologists group these four grades into two: G1 and G2 together are called low grade, and G3 and G4 together are called high grade. High-grade cancers are more likely to have spread to lymph nodes and are one of the features considered when adjuvant chemotherapy is discussed for a stage II cancer.
The grading scheme applies to conventional adenocarcinoma and not to the named types above. Medullary carcinoma is the clearest example: it looks poorly differentiated under the microscope but behaves as a low-grade cancer, so grading it in the usual way would be misleading. Pathologists also differ from one another in where they draw the line between grades more than they do for most other measurements, which is one reason grade is weighed alongside stage rather than on its own.
Tumor size is the largest measurement of the colorectal cancer, given in centimeters. Your report gives the greatest dimension and may add a second and third measurement. If the tumor could not be measured, usually because treatment before surgery left only scattered cells in a scarred area, the report says “cannot be determined” and explains why.
Size is recorded for every case, but in colorectal cancer it does not determine the stage. What determines the tumor stage is how deep the cancer has grown into the wall of the bowel, described in the tumor extent section below. A small cancer that has grown all the way through the wall is staged higher than a large one that has not. This surprises many patients, and it is worth checking the depth on your report rather than the measurement in centimeters.
This item records whether more than one separate colorectal cancer was found. Most reports say “not applicable,” meaning a single cancer was present. When more than one is found, the report says “present” and names the sites, for example, the hepatic flexure and the transverse colon.
Separate cancers in the bowel are staged individually, and the overall stage follows the highest stage rather than adding them together. When each cancer was removed in its own operation, the laboratory completes a separate checklist for each. When two or more are found in a single specimen, the lymph nodes usually cannot be separated, so one report is issued in which each tumor is labeled and described on its own, with shared findings such as margins and lymph nodes reported once. The letter “m” in brackets is added to the tumor stage to show that more than one cancer was present. Finding more than one primary cancer raises the possibility of an inherited condition, and it may prompt a discussion about genetic testing.
Tumor extent describes how far the colorectal cancer has grown through the layers of the bowel wall, from the inner lining outward. It is the single most important measurement on the report, because it determines the tumor stage.
Not every part of the large intestine has an outer peritoneal covering. The back surfaces of the ascending and descending colon and the lower rectum sit against other tissue rather than in the abdominal cavity, so the pT4a category does not apply there.
When the cancer has reached the submucosa, but not beyond, the checklist asks the pathologist to describe how deep it is. This item applies only to pT1 tumors, and reports on all other cancers mark it “not applicable.” Depth is reported as less than 1 millimeter, between 1 and 2 millimeters, or greater than 2 millimeters, and an exact measurement may be given. Some reports also describe which third of the submucosa the tumor reaches: upper, middle, or lower.
The chance that a pT1 cancer has spread to lymph nodes rises with invasion depth. It is very low when the tumor extends less than 1 millimeter into the submucosa and becomes meaningful at 2 millimeters or more. This measurement matters most when a cancer was found in a polyp removed at colonoscopy, because it is one of the findings used to decide whether an operation is needed at all.
Perforation means a hole formed through the bowel wall at the site of colorectal cancer, allowing bowel contents to leak into the abdominal cavity. The pathologist records whether a perforation was visible on the specimen with the naked eye. Reports state “not identified,” “present,” or “cannot be determined.”
Perforation is uncommon, occurring in fewer than 1 in 10 patients. When it is present, the tumor is staged as pT4a, and the finding is associated with a higher chance that the cancer will return in the abdomen. Most patients whose report mentions perforation already know it happened, because it is usually the reason emergency surgery was performed.
This item records whether colorectal cancer cells were seen inside vessels in or around the bowel wall. Vessels are one route by which cancer reaches lymph nodes and distant organs, so finding tumor cells inside one indicates the cells have gained access to that route. It does not mean the cancer has spread. The checklist separates small vessels from large ones because they carry different information, and the pathologist selects every category that applies.
Veins can be difficult to recognize once a tumor has filled and destroyed them, so pathologists sometimes use an elastic stain, which colors the elastic fibers in a vein wall and reveals invasion that would otherwise be missed. Using it can double or triple the number of cases in which venous invasion is found, which is why two reports on similar tumors may differ on this item.
Perineural invasion means colorectal cancer cells were seen wrapped around or growing inside a nerve. Nerves run through the wall of the bowel and the fat around it, and they provide another path along which a tumor can extend. The report states “not identified,” “present,” or “cannot be determined.”
Perineural invasion is associated with a higher chance that the cancer will return and with shorter survival, independent of the stage. Like extramural venous invasion, it is one of the high-risk features taken into account when the decision about chemotherapy after surgery for a stage II cancer is finely balanced.
Tumor budding describes single colorectal cancer cells, or clusters of fewer than five cells, sitting just ahead of the advancing edge of the tumor. The pathologist finds the area with the most buds, counts them within a measured field, and reports both the number and a score.
Budding carries the most weight in two situations: a cancer found in a polyp, where a high score is one of the findings that may lead to an operation, and a stage II cancer, where a high score is treated as a high-risk feature when chemotherapy is discussed.
Most colorectal cancers develop from a precancerous polyp over years. When remnants of that polyp are still visible around the cancer, the pathologist names the type. Many reports say “none identified,” which means the cancer has overgrown and destroyed the polyp it came from.
Some patients with colorectal cancer, most often those with rectal cancer, receive chemotherapy, radiation, or both before surgery. This is called neoadjuvant or presurgical therapy. When it has been given, the pathologist describes how much cancer is left and how much the treatment appears to have changed it, using a scoring system known as the modified Ryan scheme.
Two details of this scoring often confuse. Treated tumors frequently leave behind pools of mucin containing no cancer cells at all, and these are counted as eradicated tumor rather than as residual cancer, so they do not raise the stage or count as a positive lymph node. And the response is scored on the main tumor only, not on the lymph nodes. Reports on patients treated before surgery use the letter “y” in front of the stage, written as ypT and ypN, to show that the stage reflects the cancer after treatment rather than before it. A complete response is associated with substantially better long-term outcomes. Tumor regression scoring is also used in some laboratories under other published systems, and your report will name the one it used.
A margin is the cut edge of the tissue removed at surgery. For colorectal cancer, the pathologist assesses several different margins and measures how close the tumor comes to each. The report first gives a single overall statement, then details.
The named margins are the following:
The radial margin is treated differently from the others. For rectal cancer, it is counted as positive when tumor is 1 millimeter or less from the inked surface, not only when tumor reaches the surface, because the risk of the cancer returning in the pelvis is similar at either distance. A positive radial margin raises that risk several-fold, which is why the distance is reported separately for every rectal cancer. The smooth outer peritoneal surface of the bowel is not a surgical margin, since the surgeon did not cut through it; tumor reaching it is recorded as pT4a instead.
For rectal cancers, the report gives two distances separately: the distance from the tumor to the radial margin and the distance from the tumor to the distal margin (the cut end below the tumor). If one of these was already given as the closest margin, the report says so rather than repeating the number.
Your report also states the margin status for non-invasive tumor separately, covering high-grade dysplasia, intramucosal carcinoma, and low-grade dysplasia at the cut ends. This matters most in patients with inflammatory bowel disease, whose remaining bowel may carry dysplasia even where there is no invasive cancer. Some reports add a margin comment, which is free text explaining an unusual finding. Similar comment fields exist for the tumor and lymph nodes, and a general comment section at the end of the report lists any test still in progress.
Lymph nodes are small immune organs found throughout the body. Colorectal cancer usually reaches the lymph nodes that sit alongside the blood vessels supplying the affected segment of bowel, and those nodes come out with the specimen. Whether cancer is found in them is the strongest single factor in staging colorectal cancer, and it is the main reason a length of bowel is removed rather than just the tumor.
Your report will include:
Two size categories are treated differently. Single cells or clusters measuring less than 0.2 millimeters are called isolated tumor cells, and a node containing only these is not counted as involved; the stage stays pN0, and the finding is described in a comment. Deposits between 0.2 and 2 millimeters are called micrometastases, and these nodes are counted as involved.
Extranodal extension, meaning cancer cells that have broken through the outer capsule of a lymph node into the surrounding fat, is not a required item on this checklist. Still, some pathologists describe it in a comment. Where it is reported in colorectal cancer, it is associated with a higher chance of recurrence.
A tumor deposit is a separate nodule of colorectal cancer in the fat around the bowel, within the area drained by the tumor, with no recognizable lymph node tissue. The report states “not identified,” “present” with the number found, or “cannot be determined.”
Tumor deposits are counted separately from lymph nodes and from vessel invasion, and the distinction is made by what surrounds the nodule. If the pathologist can identify the remnant of a vein wall around it, it is recorded as venous invasion. If it sits in or around a large nerve, it is recorded as perineural invasion. If it contains lymph node tissue, it is a positive lymph node. Only when none of these is present is it called a tumor deposit, and the nodule’s size and shape do not matter.
When tumor deposits are found, and no lymph node contains cancer, the nodal stage is recorded as pN1c regardless of how deep the tumor has grown, and chemotherapy after surgery is generally considered. When positive lymph nodes are also present, the nodal stage is based on the nodes, and the number of deposits is still recorded. After treatment given before surgery, a nodule of this kind may represent residual main tumor rather than a true deposit, so pathologists apply the term cautiously in that setting.
This item records whether colorectal cancer was confirmed under the microscope in a site outside the colon, the rectum, and their regional lymph nodes. It is completed only when tissue from that site was actually examined.
Pathologic stage summarizes how far the colorectal cancer had spread at the time of surgery. It is described using the TNM system from the American Joint Committee on Cancer (AJCC), 8th edition, where T describes how deep the tumor has grown, N describes the lymph nodes, and M describes spread to distant organs. The letter “p” in front means the category was determined by examining tissue under the microscope. M is almost always determined by imaging rather than by the pathologist, so most reports leave it blank or mark it not applicable.
Two prefixes may appear before the letters. A “y” means the stage was assigned after treatment given before surgery and describes what was present at the time of the operation rather than at diagnosis. An “r” means the tumor is a recurrence, staged after a period during which no disease was detectable.
The pathologic stage on your report is not the same as the overall stage group (stage I through IV) that your oncologist will discuss with you. The stage group combines the T, N, and M categories into a single number and is assigned by the treating physician using all available information, not by the pathologist. In broad terms, stage I is a cancer confined to the wall of the bowel with no involved nodes, stage II has grown through the wall with no involved nodes, stage III has reached the lymph nodes, and stage IV has spread to another organ. A report that reads pT2 does not mean stage II.
The tumor stage for colorectal cancer is based entirely on how deep the tumor has grown into and through the wall of the bowel. The size of the tumor does not enter into it.
The letter “m” in brackets after the T category means more than one separate cancer was present.
The nodal stage is based on how many regional lymph nodes contain colorectal cancer, and on whether tumor deposits were found.
A node counts as positive when the deposit measures 0.2 millimeters or more.
The metastasis category is completed only when tissue examination confirms spread to a distant site. Otherwise, the report marks it as not applicable.
When a segment of bowel is removed for colorectal cancer, the pathologist examines the tissue around the tumor as well and records any additional findings. None of these change the stage, and most are common conditions found by chance. They are recorded because they affect follow-up.
Biomarker testing is part of the workup of every colorectal cancer. These tests measure specific proteins and genes in the tumor to determine which treatments are likely to work, and one also screens for an inherited condition. The results are reported on a separate CAP biomarker template rather than in the resection checklist, so they often arrive days or weeks after the main report, and your report may say that a test is pending. Some are performed on the original colonoscopy biopsy and repeated in the surgical report for completeness.
The biomarker template lists more items than any single patient will have tested. Which ones were performed depends on your cancer stage and your hospital’s practice, so a short biomarker report is not incomplete.
The mismatch repair system is a set of proteins that find and correct errors made when a cell copies its DNA. When one of these proteins is missing, errors accumulate in short repeated stretches of DNA called microsatellites, and the tumor is described as microsatellite unstable. Every colorectal cancer is tested for this, and it is the most consequential molecular result on the report.
Testing is done in one of two ways, and many laboratories perform both. Immunohistochemistry checks whether four proteins are present in the nuclei of the tumor cells, and each is reported on its own line as intact nuclear expression, loss of nuclear expression, or cannot be determined.
Your report may also state that the background non-neoplastic tissue, or internal control, showed intact nuclear expression. That line confirms the stain worked. Normal cells on the same slide, such as immune cells and the lining of the surrounding bowel, always carry these proteins, so if they failed to stain, the result in the tumor could not be trusted.
Below the four results, the report gives an interpretation in a full sentence. These are standard wordings, and yours will be one of the following:
The word “probability” in these sentences is doing real work. None of them diagnoses Lynch syndrome. They describe what the tumor stain suggests and what test would answer the question, and only a germline test on a blood or saliva sample can confirm an inherited change. Reports also note exceptions to these interpretations, which is why genetic counseling is offered rather than a conclusion drawn from the stain alone. Prior radiation or chemotherapy can reduce or alter MSH6 staining, a recognized exception.
The second method tests the microsatellites in the tumor DNA directly, usually by polymerase chain reaction, and is reported as follows:
At least five markers are tested. Your report may name them individually and state whether each was stable or unstable. Two panels are commonly used: a five-marker mononucleotide panel, whose markers are called BAT-25, BAT-26, NR-21, NR-24, and Mono-27, and the older National Cancer Institute panel, which adds markers called D2S123, D5S346, and D17S250. Seeing this list of code names on your report means the laboratory has shown its work.
A deficient or unstable result carries three consequences. It indicates eligibility for immunotherapy drugs such as pembrolizumab, which work considerably better in these tumors than in others and are approved for this result regardless of where the cancer started. It carries a more favorable outlook in early-stage disease, and it indicates that chemotherapy with fluorouracil alone is unlikely to help a stage II cancer. It may point to Lynch syndrome, an inherited condition that raises the risk of colorectal, uterine, and several other cancers in the person and their relatives. Lynch syndrome accounts for roughly 2 to 3 out of every 100 colorectal cancers, while an acquired cause accounts for around 15 out of 100.
When mismatch repair testing on a colorectal cancer shows loss of MLH1 and PMS2, this test is performed to establish whether the cause was acquired during life rather than inherited. Methylation is a chemical tag that a cell can attach to a gene to switch it off. When the tag builds up on the switch region of the MLH1 gene, the cell stops making the protein even though the gene itself is normal. This happens in ordinary tumors and is not passed to children.
KRAS and NRAS are genes that carry growth signals inside colorectal cancer cells. A mutation in either one switches that signal on permanently, so it no longer depends on the receptor above it in the chain. Both genes are tested, and the result matters for one specific treatment decision.
When a mutation is found, the report names exactly where it sits in the gene. Four locations, called codons, are tested: 12, 13, 61, and 146. Your report may list which of them were assessed, which is worth checking, because a report that examined only codons 12 and 13 has not excluded a mutation at 61 or 146.
The mutation itself is written in a form that looks forbidding but is simple to read. In “Gly12Asp,” the number is the codon, and the two three-letter abbreviations are the amino acid that should be there and the one that replaced it, so this means that at position 12 a glycine has been replaced by an aspartic acid. The same change is often written as G12D. A version in brackets, such as “GGT>GAT,” gives the underlying change in the DNA letters. All of these describe one finding, not several.
One particular change, KRAS G12C, is now separately targetable in advanced disease, and drugs directed at it are used in combination with an anti-EGFR antibody. If your report names a KRAS mutation, it will also name the specific change, and your oncologist can tell you whether that change opens a treatment pathway.
BRAF is another gene in the same growth signaling chain that carries signals inside colorectal cancer cells. The V600E mutation is found in roughly 8 to 12 out of every 100 colorectal cancers, more often in tumors on the right side and in mucinous cancers. It may be reported in two ways. An immunohistochemistry stain detects the abnormal protein directly and is reported as positive, negative, or undetermined. A DNA test is reported as no mutation detected, BRAF V600E detected, another BRAF mutation with the change named, or cannot be determined. Your report may name which changes the laboratory looked for.
This result does three things. In cancer that has spread, a V600E mutation indicates eligibility for a combination of encorafenib, cetuximab, and chemotherapy, which is approved as a first treatment for BRAF V600E colorectal cancer. It carries a less favorable outlook than tumors without the mutation, particularly in advanced disease. And when it is found alongside loss of MLH1, it effectively rules out Lynch syndrome as the cause, because this mutation is not seen in Lynch-associated tumors. A BRAF mutation also predicts that anti-EGFR therapy alone will not work.
PIK3CA carries growth signals along a different route inside colorectal cancer cells, one that runs beneath both the receptor targeted by anti-EGFR drugs and the KRAS pathway. Almost all mutations sit in one of two regions of the gene, called exon 9 and exon 20, and the report states either that no mutation was detected or which exon the mutation was found in, with the specific change named.
The two locations do not carry the same meaning. Several studies have linked mutations in exon 20 to a poorer response to cetuximab in tumors that are otherwise RAS wild type. In contrast, exon 9 mutations tend to travel alongside KRAS mutations and have not shown an independent effect. The evidence is not settled, so this result is used as supporting information rather than as a decision on its own.
PTEN is a brake on the same signaling route as PIK3CA, so losing it has an effect similar to switching that route on. In colorectal cancer, it may be reported by staining or by DNA testing.
The role of PTEN loss in choosing treatment is not settled, and it does not currently determine eligibility for a drug on its own.
HER2 is a protein on the surface of cells that signals them to grow. Roughly 2 to 3 out of every 100 colorectal cancers make far too much of it, usually because the tumor carries extra copies of the HER2 gene. The figure rises to about 5 out of 100 among cancers that are RAS- and RAF-wild type, because HER2 overexpression and RAS or RAF mutation rarely occur in the same tumor. Testing begins with immunohistochemistry, which is scored from 0 to 3+.
Alongside the score, your report may give the strength of the staining, described as none, faint or barely perceptible, weak to moderate, or strong, and the proportion of tumor cells showing staining around the edge of the cell, given as less than 10 percent, 10 to 49 percent, or 50 percent or more. It will also name the scoring system used, because colorectal cancer has no scoring system of its own and laboratories borrow one. The three in use are the breast cancer criteria, the stomach and esophagus criteria, and a set called HERACLES developed for a colorectal cancer trial. They differ mainly in how much of the tumor has to stain, which is why two laboratories can score the same tumor differently, and why the system is named on the report.
An equivocal result may proceed to in situ hybridization, often performed as fluorescence in situ hybridization, which counts gene copies inside individual cells and is reported as amplified (positive) or not amplified (negative). A dual-probe test also counts a fixed landmark on the same chromosome and reports the ratio between the two, along with the average number of HER2 signals per cell. HER2 may instead be assessed on a sequencing panel and reported simply as positive or negative for extra copies or a mutation in the gene.
Some laboratories report a multigene assay that measures the activity of a panel of genes in a colorectal cancer and returns an estimate of the risk that the cancer will return. The result is given as low, moderate, or high risk, and often as a numeric recurrence score. These assays are not part of routine care in colorectal cancer the way they are in breast cancer, and where one has been performed, your oncologist can explain what weight it carried in the plan.
Many patients with colorectal cancer that has spread have their tumor tested on a large next-generation sequencing panel that examines dozens or hundreds of genes at once. Several results from such a panel may appear on your report even though they are not items on the CAP biomarker template.
The biomarker report for colorectal cancer usually ends with a section describing the methods, so another laboratory can judge how much weight to give the result. A patient can use two items in it.
The first is the percentage of tumor cells in the tested sample, sometimes called cellularity. Sequencing tests need a minimum proportion of tumor cells to detect a mutation reliably, so a low percentage usually explains a result reported as cannot be determined. The second is the dissection method, which describes how the tumor was separated from surrounding normal tissue before testing: cut out under a microscope by the pathologist, cored from the block, or tested as a whole section with no separation. Both are recorded because they affect how confident the laboratory can be in a negative result. The section also names the specific test, antibody, or instrument used for each marker, and it may record how the tissue was preserved and how long it sat before preservation, since delays degrade the DNA.
You can read more about the tests described here in the Biomarkers and Genetic Testing section of this website.
Prognosis is the expected course of a disease. For colorectal cancer, the outlook depends far more on how far the cancer had spread when it was removed than on any other single feature. When the cancer is still confined to the wall of the bowel, roughly 90 out of every 100 people are alive five years later. When it has reached nearby lymph nodes, that figure is about 73 out of 100. When it has spread to distant organs, it is closer to 15 out of 100, although this figure has been improving as surgery for liver spread and newer drug treatments have become more widely used. Across all stages combined, roughly 65 out of every 100 people diagnosed with colorectal cancer are alive five years later.
These figures describe large groups of people diagnosed years ago and cannot predict what will happen to any one person. Your own outlook depends on the combination of findings in your report, above all the following:
The pathology report for colorectal cancer is the document your treatment team uses to plan what comes next. A group that typically includes a surgeon, a medical oncologist, a radiation oncologist, a pathologist, and a radiologist coordinates care and often reviews reports together at a tumor board meeting.
The findings on your report shape several decisions:
If any part of your report is unclear, your treating physician can request the full report from the laboratory and go through it with you, and a second opinion on the pathology can be arranged if you would like one.
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